A List of journals related to our research
The ACM Transactions on Modeling and Computer Simulation (TOMACS) provides a single archival source for the publication of high-quality research and developmental results in computer simulation.
Annals of Biomedical Engineering is an interdisciplinary, international journal which presents original articles in the major fields of bioengineering and biomedical engineering.
Artificial Life is devoted to a new discipline that investigates the scientific, engineering, philosophical, and social issues involved in our rapidly increasing technological ability to synthesize life.
Bioinformatics publishes the highest quality scientific papers and review articles of interest to academic and industrial researchers. Its main focus is on new developments in genome bioinformatics and computational biology.
Biology Direct aims to publish original research articles, hypotheses, and reviews from the full spectrum of biology; the first subject areas launched are Genomics, Bioinformatics, Systems Biology and Immunology and Mathematical Biology.
BioSystems publishes experimental, computational, and theoretical articles that link biology, evolutionary thinking, and the information processing sciences.
BMC Bioinformatics is an Open Access, peer-reviewed journal that considers articles on all aspects of computational methods used in the analysis and annotation of sequences and structures, as well as all other areas of computational biology.
BMC Systems Biology is an open access journal publishing original peer-reviewed research articles in systems-level analysis of biological events, whether experimental or theoretical, at the level of molecules, cells or organisms.
Complexity is a cross-disciplinary journal focusing on the rapidly expanding science of complex adaptive systems, with such themes as chaos, genetic algorithms, cellular automata, neural networks, and evolutionary game theory.
CMMM (formerly Journal of Theoretical Medicine) seeks to promote interdisciplinary collaboration between those interested in the theoretical and clinical aspects of medicine and to encourage the application of mathematics to biomedical problems.
Computational Biology and Chemistry publishes articles in all areas of computational life sciences, particularly in the areas of nucleic acid and protein sequence research, molecular genetics, and structural biology of nucleic acids and proteins.
Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice.
An important reference for all pharmacology and toxicology departments, DMD is also a valuable resource for medicinal chemists involved in drug design and biochemists with an interest in drug metabolism.
The journal&rsuqot;s primary goal is to act as a forum for communication across all branches of modern dynamical systems, especially (but not exclusively) nonlinear systems, and to facilitate interaction between theory and applications.
The overall aim of EURASIP JBSB is to publish research results related to signal processing and bioinformatics theories and techniques relevant to a wide area of applications into the new disciplines of genomics, proteomics, and systems biology.
As the official journal of the European Federation for Pharmaceutical Sciences (EUFEPS), the journal publishes research articles on all aspects of the pharmaceutical sciences with strong emphasis on originality and scientific quality.
Journal of the Royal Society Interface is the Society's cross-disciplinary publication promoting research at the interface between the physical and life sciences.
The journal publishes peer-reviewed data and information that are useful to investigators in any discipline in biology and medicine including Biochemistry, Microbiology, Parasitology, Virology, Immunology, Biotechnology, And Bioinformatics.
The IEEE/ACM TCBB is a quarterly journal that publishes archival research results related to the algorithmic, mathematical, statistical, and computational methods that are central in bioinformatics and computational biology.
IET Systems Biology covers intra- and inter-cellular dynamics, using systems- and signal-oriented approaches.
This is a peer reviewed journal. Every published article has been reviewed by members of the editorial board and the editor-in-chief.
JBCB aims to publish high quality, original research articles, expository tutorial papers and review papers as well as short, critical comments on technical issues associated with the analysis of cellular information.
JBS is published quarterly. The goal of the Journal is to promote interdisciplinary approaches in Biology and in Medicine, and the study of biological situations with a variety of tools, including mathematical and general systems methods.
The Journal of Biomedical Informatics (formerly Computers and Biomedical Research) has been redesigned to reflect a commitment to high-quality original research papers and reviews in the area of biomedical informatics.
A peer-reviewed journal providing a forum for the communication of technical issues associated with the analysis, management, and visualization of cellular information at the molecular level.
JCSB was founded on two key tenets: To publish the most exciting researches in Computational Biology and Systems Biology. Secondly, to provide a rapid turn-around time possible for reviewing and publishing, and to disseminate the articles freely.
JPET provides coverage of all aspects of the interactions of chemicals with biological systems, including autonomic, behavioral, cellular, clinical, developmental pharmacology, as well as metabolism and disposition, chemotherapy, and toxicology.
The Journal of Pharmacokinetics and Pharmacodynamics is devoted to illustrating the importance of pharmacokinetics, pharmacodynamics, and pharmacometrics in the understanding of drug action, therapy, design, development, and evaluation.
The Journal of Theoretical Biology is the leading forum for theoretical papers that give insight into biological processes.
The Open Bioinformatics Journal is an Open Access online journal which publishes original research articles in all areas of bioinformatics and computational biology.
As an official journal of the American Association of Pharmaceutical Scientists, the journal presents papers that describe innovative research spanning the entire spectrum of drug discovery, development, evaluation, and regulatory approval.
PLoS Computational Biology features works of exceptional significance that further our understanding of living systems at all scales from molecules and cells, to patient populations and ecosystems through the application of computational methods.
PLoS ONE features reports of original research from all disciplines within science and medicine. By not excluding papers on the basis of subject area, PLoS ONE facilitates the discovery of the connections between papers across disciplines.
Simulation is the monthly refereed transactions of the leading society devoted to advancing the discipline and profession of modeling and simulation. It consists of distinct sections--one devoted to theory, the other to applicatio
TBiomed is an Open Access, peer-reviewed, online journal adopting a broad definition of "biology" and focusing on the theoretical ideas and models to which advances in biology and medicine are giving rise.
Rational Rose Visual Modeling Tools
Objectivity: A Scalable OO Database Capable of Mixed Language Support
Multi Agent Based Simulation Software
E-CELL, a modeling and simulation environment for biochemical and genetic processes
GENESIS (GEneral NEural SImulation System) A Simulation Platform For Neural Systems
Dymola - Dynamic Modeling Laboratory using Modelica language
Finite Element and Visualization
General purpose graphical Pre- and Post-Processors for numerical modeling; Finite Elements
Tools that combine technology and design to enhance communication
Spotfire - Web-based decision analytics and visualization software; Data Mining, Genomics
Pattern Discovery Software Systems Online
NIH Image is a public domain image processing and analysis program
Tools that combine technology and design to enhance communication
Tom Sawyer Software: High-quality Scalable Graph Management and Visualization
S-PLUS Statistical analysis package
The SyStat Statistics and Graphics Package
StatLib is a CMU a system for distributing statistical software, datasets, and information
The STATISTICA Software Package
Mathcad- To analyze, document, and communicate technical work
The MATLAB Environment for technical computing
Maple Analytical Computation software
Mathematica - symbolic and numerical calculations
Spotfire - Web-based decision analytics and visualization software; Data Mining, Genomics
Web Guide to Data Mining, Web Mining, Knowledge Discovery, and eCRM Modeling; Genomics
GNU Octave- A high-level language, primarily intended for numerical computations.
Personal Information Manager,Personal Organizer
Dragon Systems- Type hands-free, NaturallySpeaking
Web authoring and graphics creation
Simulink Environment for model-based and system-level design
Stella Systems Simulation software
The VisSim Modeling and Simulation Environment
The UltraSAN Advanced Modeling, Analysis, and Simulation Environment
Language Design for Multi-Domain Modeling
Xpose is an S-PLUS based model building aid for population analysis using NONMEM
A physico-chemical package to predict parameters: pKa, logP, logD